references
 
 
 

Brdu


5’-bromo-2’-deoxyuridine (BrdU) is a thymidine analogue that incorporates into dividing cells during DNA synthesis during S phase of the cell cycle (Gratzner, 1982). BrdU will replace thymidine during replication and once incorporated into the new DNA, it will remain in place and will be passed down to its progeny upon division. Specific antibodies designed to bind BrdU, and conjugated with fluorochromes, are used to label BrdU positive cells.

The development of BrdU immunohistochemistry to identify S-phase cells in the brain (Miller and Nowakowski, 1988) was an important advance over 3H thymidine autoradiography. BrdU method can be used to detect labelled cells throughout the thick tissue sections required by stereologic techniques for determining the total number of S-phase cells within a brain region (Gratzner, 1982).

The method consists of injection of BrdU into the intraperitoneal cavity followed by a variable survival time allowing for tracking the fate of divided cells and their progeny. At the end of the experiment, the animal is sacrificed and the tissues fixed with a standard paraformaldehyde-based fixative. BrdU is detected in the tissue using specific primary antibodies.

The substitution of an endogenous DNA base, Thymidine, with the BrdU analogue ensures specific labelling of only the dividing cells. This specificity of BrdU combined with the high sensitivity of fluorescence microscopy; including confocal microscopy has led to the great popularity of the method.

One useful feature of BrdU is its long-term retention in divided cells and its passage to their daughter cells. This feature can be used to trace the cell lineage and cell survival. A spectacular example of such use was a study by Eriksson and colleagues who injected patients with BrdU and then examined brain tissue post-mortem up to 2 years later.

However, BrdU also has some drawbacks. First, it may not be absolutely specific for dividing cells, i.e., BrdU could potentially be picked up by cells that are undergoing repair of DNA in addition to cells replicating their complete genome (Korr et al., 1989; Selden et al., 1993; Schmitz et al., 1999).

Additionally, BrdU may act as a mutagen in cells that have picked up BrdU. High doses of BrdU have also been shown to have adverse effects, consequently resulting in severe abnormalities of the developing tissues on embryonic and neonatal rats (Bannigan, 1985; Kolb et al., 1999).

These side effects aside, the use of BrdU in whole-animal experiments is difficult due to uncertainty of diffusion of this substance among the various tissues of the body following intraperitoneal injection. For example, the blood brain barrier may prevent the BrdU from freely penetrating the brain tissue, especially in old animals (Cameron and McKay, 2001).

   
 

BrdU Protocol


Positive Control Tissue: BrdU injected young rat hippocampus fixed with 4% paraformaldehyde.

Tissue: Rat Hippocampus

Fixation: 4% Paraformaldehyde in PBS pH 7.2

Primary Antibody: Rat anti-BrdU (Accurate Chemical & Scientific,  Cat# ).

Ideal Dilution Ratio 1:200

Secondary Antibody: Alexa 488 Rabbit anti-rat IgG (H+L), (Molecular Probes, Cat# ).

Optimal dilution 1:200

ABC Reagent:
HRP-streptavidin (Vector Laboratories, Cat# SA-5004). Optimal dilution 1:400 or VECTASTAIN Elite ABC Kit (Vector Laboratories, Cat# PK-6100).

DAB Reagent: 0.02% DAB and 0.003% H 2O2in PBS

  • 1. Denature DNA by incubating sections in 1N HCl for 60 minutes at 45C.
  • 2. Neutralize the acid by rinsing the sections 3x5 minutes in PBS. wash sections in PBS for 1x5min.
  • 3. Blocking: incubate sections with 2% normal goat/rabbit/horse (ideally, it should be from the host of the secondary antibody) serum in PBS for 1 hour to block non-specific binding.
  • 4. Primary antibody: incubate sections with rat anti-BrdU diluted 1:100 in 0.3% Triton X-100 in PBS for 24 hour at 4 C while shaking.
  • 5. Wash in PBS for 3x5min.
  • 6. Secondary antibody: incubate sections with Alexa 488 rabbit anti-rat IgG diluted 1:200 in 0.3% Triton X-100 in PBS for 2 hours at room temperature. (for ABC, use rabbit anti-rat IgG diluted in PBS)
  • 7. Wash in PBS for 3x5min.
    • ABC: incubate sections with HRP-streptavidin reagent diluted 1:400 in PBS for 30 minutes at room temperature (or use ABC kit and following instruction in the kit).
    • Wash in PBS for 3x5min.
    • DAB: incubate sections with DAB solution for 2-10 minutes.
  • Wash in distilled water 2x5min.
  • Coverslip with mounting medium (Permafluor for fluorecent tissues and Permount for DAB tissues).